Differential geometry based solvation model. III. Quantum formulation

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Differential geometry based solvation model. III. Quantum formulation.

Solvation is of fundamental importance to biomolecular systems. Implicit solvent models, particularly those based on the Poisson-Boltzmann equation for electrostatic analysis, are established approaches for solvation analysis. However, ad hoc solvent-solute interfaces are commonly used in the implicit solvent theory. Recently, we have introduced differential geometry based solvation models whic...

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Differential geometry based solvation model I: Eulerian formulation

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Differential geometry based solvation model II: Lagrangian formulation.

Solvation is an elementary process in nature and is of paramount importance to more sophisticated chemical, biological and biomolecular processes. The understanding of solvation is an essential prerequisite for the quantitative description and analysis of biomolecular systems. This work presents a Lagrangian formulation of our differential geometry based solvation models. The Lagrangian represe...

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Differential geometry (DG) based solvation models are a new class of variational implicit solvent approaches that are able to avoid unphysical solvent-solute boundary definitions and associated geometric singularities, and dynamically couple polar and non-polar interactions in a self-consistent framework. Our earlier study indicates that DG based non-polar solvation model outperforms other meth...

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ژورنال

عنوان ژورنال: The Journal of Chemical Physics

سال: 2011

ISSN: 0021-9606,1089-7690

DOI: 10.1063/1.3660212